In this lesson, we cover the basics of constructing and running a WRF-Hydro simulation using a prepared domain for the gridded routing configuration.
For a detailed description of model configurations see the Technical Description.
In this section we describe the primary files needed to run a WRF-Hydro simulation.
A WRF-Hydro simulation consists of the following major components:
In this lesson we only cover basic descriptions of these elements. For a detailed description see the Technical Description.
The WRF-Hydro model code, compiled executable/binary, and associated parameter table files were described in Lesson 1.
If you have not already completed Lesson 1, please stop and do so now
Model run-time options are specified in two namelist files hydro.namelist
and namelist.hrldas
. These namelist files contain file path specifications, simulation duration, physics options, and output file selections, among others. We will cover many of these options in more depth in Lessons 4 and 5.
This lesson will use a prepared domain located in the ~/wrf-hydro-training/example_case
directory. The structure of the example_case
directory serves as a good example of how to organize your domain files. If using another domain with this lesson, such as one you may have created in the geospatial pre-processing tutorial, it is imperative that the file names and directory structure match those described below.
If using an official WRF-Hydro training example case, there will be a study area map and a readme file that describes the geographic setting, the directory, and the files.
First lets take a look at the Study_Map.png.
Now, lets view the readme file included with the domain for a brief description of the example case and its contents.
cd ~/wrf-hydro-training/example_case
cat README.txt
#Overview: This test case includes prepared geospatial data and input files for a sample domain (region of interest) and prepared forcing data. This domain is a small region (15km x 16km) encompassing the West Branch of the Croton River, NY, USA (USGS stream gage 0137462010) during hurricane Irene, 2011-08-26 to 2011-09-02. The simulation begins with a restart from a spinup period of 2010-08-01 to 2011-08-26. The forcing data prepared for this test case is derived from the North American Land Data Assimilation System (NLDAS) hourly meteorological forcing data. There are 3 basic model configurations included in the test case: National Water Model (NWM), Gridded, and NCAR Reach. See the WRF-Hydro v5 Technical Description located at https://ral.ucar.edu/projects/wrf_hydro for a more detailed description of model physics options, configurations, and input files. For instructions on how to set up and run this test case see the Test Case User Guide available from https://ral.ucar.edu/projects/wrf_hydro/testcases #Directory contents Croton_NY: directory containing all input files for the Croton, NY example test case | -FORCING: Directory containing all NLDAS hrldas formatted hourly forcing data for the simulation period -Gridded: Directory containing all files required for the gridded routing configuration with lakes included | -DOMAIN: Directory containing all geospatial data and input files for the Gridded routing option. -lake_shapes: directory containing shape files that define lakes -RESTART: Directory containing model restart files for the Gridded routing option -hydro.namelist: Fortran namelist file for the hydro model -namelist.hrldas: Fortran namelist file for the Noah-MP land surface model. -Gridded_no_lakes: Directory containing all files required for the gridded routing configuration without lakes | -DOMAIN: Directory containing all geospatial data and input files for the Gridded routing option -RESTART: Directory containing model restart files for the Gridded routing option -hydro.namelist: Fortran namelist file for the hydro model -namelist.hrldas: Fortran namelist file for the Noah-MP land surface model -NWM: Directory containing all files required for the National Water Model (NWM) routing configurations | -DOMAIN: Directory containing all geospatial data and input files for the NWM full routing option. -DOMAIN_LR: Directory containing all geospatial data and input files for the NWM routing option for long-range forecasts -RESTART: Directory containing model restart files for the NWM routing option -RESTART_LR: Directory containing model restart files for the NWM routing option for long-range domain files -nudgingTimeSliceObs: Directory containing nudging "time slice" observation files -hydro.namelist: Fortran namelist file for the hydro model -namelist.hrldas: Fortran namelist file for the Noah-MP land surface model -Reach: Directory containing all files required for NCAR reach routing configuration | -DOMAIN: Directory containing all geospatial data and input files for the NCAR reach routing option -stream_network: directory containing files that define the stream network -RESTART: Directory containing model restart files for the NCAR reach routing option -hydro.namelist: Fortran namelist file for the hydro model -namelist.hrldas: Fortran namelist file for the Noah-MP land surface model -ReachLakes: Directory containing all files required for NCAR reach routing configuration with lakes included | -DOMAIN: Directory containing all geospatial data and input files for the NCAR reach routing option -stream_network: directory containing files that define the stream network -RESTART: Directory containing model restart files for the NCAR reach routing option -hydro.namelist: Fortran namelist file for the hydro model -namelist.hrldas: Fortran namelist file for the Noah-MP land surface model -supplemental: Directory containing supplemental files used to create the example case, including forcing files used for spinup | -supplemental_forcing.tar.gz: Additional forcing data for spinup -namelist.wps: WPS namelist.wps used to create the geogrid file for non-NWM configurations -supp_precip.tar.gz: Supplemental regridded StageIV precipitation data -USGS_obs.csv: CSV file containing USGS 15 minute streamflow data for gages in the domain -study_map.PNG: Study area map
Now lets take a look at the example_case
directory.
ls
FORCING Gridded_no_lakes Reach README.txt supplemental Gridded NWM ReachLakes study_map.PNG USGS_obs.csv
In this example case we have created several configurations for WRF-Hydro: National Water Model (NWM), Gridded, and Reach. For detailed descriptions of routing and physics configurations see the Technical Description. These model configurations have different geospatial data associated with them, and thus are represented by separate directories in the ~/wrf-hydro-training/example_case
directory.
This directory contains all of the forcing data for our simulation. Note that there is only one FORCING
directory. The same forcing data can be used with all three configurations.
For this lesson, we will be running the Gridded configuration. Now we will explore the ~/wrf-hydro-training/example_case/Gridded
directory.
ls Gridded
DOMAIN hydro.namelist namelist.hrldas RESTART
The contents of this directory are described briefly in the README.txt
file that we viewed earlier, but we will discuss them again here. For a more detailed description of these files beyond what will be described below, see the Technical Description
DOMAIN: Directory containing all geospatial data and input files for the Gridded routing option with lakes included
ls Gridded/DOMAIN
Fulldom_hires.nc GWBUCKPARM.nc soil_properties.nc geo_em.d01.nc hydro2dtbl.nc wrfinput_d01.nc GEOGRID_LDASOUT_Spatial_Metadata.nc LAKEPARM.nc GWBASINS.nc lake_shapes
Filename | Description | Source | Required |
---|---|---|---|
Fulldom_hires.nc | High resolution full domain file. Includes all fields specified on the routing grid. | WRF-Hydro GIS pre-processing toolkit | Yes |
GWBASINS.nc | 2D file defining the locations of groundwater basins on a grid | WRF-Hydro GIS pre-processing toolkit | When the baseflow bucket model is turned on and user defined mapping is off |
GWBUCKPARM.nc | Groundwater parameter table containing bucket model parameters for each basin | WRF-Hydro GIS pre-processing toolkit | When the baseflow bucket model is turned on |
LAKEPARM.nc | Lake parameter table containing lake model parameters for each catchment | WRF-Hydro GIS pre-processing toolkit | When lake and reservoir routing is turned on |
hydro2dtbl.nc | Spatially distributed parameter table for lateral flow routing within WRF-Hydro. | create_SoilProperties.R script (will also be automatically generated by WRF-Hydro) | When using spatially distributed terrain routing parameters |
geo_em.d01.nc | The data required to define the domain and geospatial attributes of a spatially-distributed, or gridded, 1-dimensional (vertical) land surface model (LSM) | GEOGRID utility in the WRF preprocessing system (WPS) | Yes |
wrfinput_d01.nc | file including all necessary fields for the Noah-MP land surface model, but with spatially uniform initial conditions. Users should be aware that the model will likely require additional spin-up time when initialized from this file. | create_Wrfinput.R script | Yes |
soil_properties.nc | Spatially distributed land surface model parameters | create_SoilProperties.R script | If SPATIAL_SOIL compile-time option set to 1 |
GEOGRID_LDASOUT_Spatial_Metadata.nc | projection and coordinate information for the land surface model grid. | pre-processor | No, but allows for CF compliant outputs |
lake_shapes/ | supplemental shape files that define lakes | pre-processor | No |
RESTART: Directory containing model restart files
ls Gridded/RESTART
HYDRO_RST.2011-08-26_00:00_DOMAIN1 RESTART.2011082600_DOMAIN1
Restart files are an essential part of the WRF-Hydro modeling system. They are output on a fixed timestep specified by the user in the namelist.hrldas
and hydro.namelist
files, and represent a complete 'snapshot' of the model state at that time. These files can be used to restart a WRF-Hydro simulation from where the previous simulation terminated with all the model states intact.
When running a WRF-Hydro simulation, you may start your simulation with default initial conditions, referred to as a 'cold start'. When starting from a cold start, a model spinup period is needed to move the model state away from the default initial conditions to a more realistic, physically-based model state. Model output from the spinup period is generally not used for interpretation.
Restart files output at the end the spinup period can be used as the initial conditions for subsequent simulations, referred to as a 'warm start'. Simulations that start from a 'warm start' are generally the primary target for interpretation. 'Warm' and 'cold' starting the model will be discussed more in Lesson 4.
Namelists are another key component of the WRF-Hydro modeling system and are the primary means of specifying inputs, outputs, and run-time options. There are two namelist files used by WRF-Hydro: hydro.namelist
for the routing and hydrologic model and namelist.hrldas
for the land surface model.
NOTE: These filenames are hard-coded into the model and can not be changed.
For all official WRF-Hydro domains, namelists will be included with each of the model configurations. This is done so that a user can easily run each configuration with minimal setup, and they serve as a starting point for users to specify their own namelists for a given configuration.
There are different namelists for each configuration because certain namelist options are specific to the domain configuration used. We will cover the various namelist options in detail in Lesson 4, but for now we will simply view the namelist and use the default namelist provided with the Gridded configuration to construct our simulation.
Take a moment and read through the two namelists below and note how all filepaths are relative to the current directory containing the namelist. This is the recommended way of specifying filepaths.
cat Gridded/hydro.namelist
&HYDRO_nlist !!!! ---------------------- SYSTEM COUPLING ----------------------- !!!! ! Specify what is being coupled: 1=HRLDAS (offline Noah-LSM), 2=WRF, 3=NASA/LIS, 4=CLM sys_cpl = 1 !!!! ------------------- MODEL INPUT DATA FILES ------------------- !!!! ! Specify land surface model gridded input data file (e.g.: "geo_em.d01.nc") GEO_STATIC_FLNM = "./DOMAIN/geo_em.d01.nc" ! Specify the high-resolution routing terrain input data file (e.g.: "Fulldom_hires.nc") GEO_FINEGRID_FLNM = "./DOMAIN/Fulldom_hires.nc" ! Specify the spatial hydro parameters file (e.g.: "hydro2dtbl.nc") ! If you specify a filename and the file does not exist, it will be created for you. HYDROTBL_F = "./DOMAIN/hydro2dtbl.nc" ! Specify spatial metadata file for land surface grid. (e.g.: "GEOGRID_LDASOUT_Spatial_Metadata.nc") LAND_SPATIAL_META_FLNM = "./DOMAIN/GEOGRID_LDASOUT_Spatial_Metadata.nc" ! Specify the name of the restart file if starting from restart...comment out with '!' if not... RESTART_FILE = 'RESTART/HYDRO_RST.2011-08-26_00:00_DOMAIN1' !!!! --------------------- MODEL SETUP OPTIONS -------------------- !!!! ! Specify the domain or nest number identifier...(integer) IGRID = 1 ! Specify the restart file write frequency...(minutes) ! A value of -99999 will output restarts on the first day of the month only. rst_dt = 1440 ! Reset the LSM soil states from the high-res routing restart file (1=overwrite, 0=no overwrite) ! NOTE: Only turn this option on if overland or subsurface rotuing is active! rst_typ = 1 ! Restart file format control rst_bi_in = 0 !0: use netcdf input restart file (default) !1: use parallel io for reading multiple restart files, 1 per core rst_bi_out = 0 !0: use netcdf output restart file (default) !1: use parallel io for outputting multiple restart files, 1 per core ! Restart switch to set restart accumulation variables to 0 (0=no reset, 1=yes reset to 0.0) RSTRT_SWC = 1 ! Specify baseflow/bucket model initialization...(0=cold start from table, 1=restart file) GW_RESTART = 1 !!!! -------------------- MODEL OUTPUT CONTROL -------------------- !!!! ! Specify the output file write frequency...(minutes) out_dt = 60 ! Specify the number of output times to be contained within each output history file...(integer) ! SET = 1 WHEN RUNNING CHANNEL ROUTING ONLY/CALIBRATION SIMS!!! ! SET = 1 WHEN RUNNING COUPLED TO WRF!!! SPLIT_OUTPUT_COUNT = 1 ! Specify the minimum stream order to output to netcdf point file...(integer) ! Note: lower value of stream order produces more output. order_to_write = 1 ! Flag to turn on/off new I/O routines: 0 = deprecated output routines (use when running with Noah LSM), ! 1 = with scale/offset/compression, ! 2 = with scale/offset/NO compression, ! 3 = compression only, 4 = no scale/offset/compression (default) io_form_outputs = 4 ! Realtime run configuration option: ! 0=all (default), 1=analysis, 2=short-range, 3=medium-range, 4=long-range, 5=retrospective, ! 6=diagnostic (includes all of 1-4 outputs combined) io_config_outputs = 5 ! Option to write output files at time 0 (restart cold start time): 0=no, 1=yes (default) t0OutputFlag = 1 ! Options to output channel & bucket influxes. Only active for UDMP_OPT=1. ! Nonzero choice requires that out_dt above matches NOAH_TIMESTEP in namelist.hrldas. ! 0=None (default), 1=channel influxes (qSfcLatRunoff, qBucket) ! 2=channel+bucket fluxes (qSfcLatRunoff, qBucket, qBtmVertRunoff_toBucket) ! 3=channel accumulations (accSfcLatRunoff, accBucket) *** NOT TESTED *** output_channelBucket_influx = 0 ! Output netcdf file control CHRTOUT_DOMAIN = 0 ! Netcdf point timeseries output at all channel points (1d) ! 0 = no output, 1 = output CHANOBS_DOMAIN = 1 ! Netcdf point timeseries at forecast points or gage points (defined in Routelink) ! 0 = no output, 1 = output at forecast points or gage points. CHRTOUT_GRID = 0 ! Netcdf grid of channel streamflow values (2d) ! 0 = no output, 1 = output ! NOTE: Not available with reach-based routing LSMOUT_DOMAIN = 0 ! Netcdf grid of variables passed between LSM and routing components (2d) ! 0 = no output, 1 = output ! NOTE: No scale_factor/add_offset available RTOUT_DOMAIN = 0 ! Netcdf grid of terrain routing variables on routing grid (2d) ! 0 = no output, 1 = output output_gw = 1 ! Netcdf GW output ! 0 = no output, 1 = output outlake = 1 ! Netcdf grid of lake values (1d) ! 0 = no output, 1 = output frxst_pts_out = 0 ! ASCII text file of forecast points or gage points (defined in Routelink) ! 0 = no output, 1 = output !!!! ------------ PHYSICS OPTIONS AND RELATED SETTINGS ------------ !!!! ! Specify the number of soil layers (integer) and the depth of the bottom of each layer... (meters) ! Notes: In Version 1 of WRF-Hydro these must be the same as in the namelist.input file. ! Future versions will permit this to be different. NSOIL=4 ZSOIL8(1) = -0.10 ZSOIL8(2) = -0.40 ZSOIL8(3) = -1.00 ZSOIL8(4) = -2.00 ! Specify the grid spacing of the terrain routing grid...(meters) DXRT = 250.0 ! Specify the integer multiple between the land model grid and the terrain routing grid...(integer) AGGFACTRT = 4 ! Specify the channel routing model timestep...(seconds) DTRT_CH = 10 ! Specify the terrain routing model timestep...(seconds) DTRT_TER = 10 ! Switch to activate subsurface routing...(0=no, 1=yes) SUBRTSWCRT = 1 ! Switch to activate surface overland flow routing...(0=no, 1=yes) OVRTSWCRT = 1 ! Specify overland flow routing option: 1=Seepest Descent (D8) 2=CASC2D (not active) ! NOTE: Currently subsurface flow is only steepest descent rt_option = 1 ! Switch to activate channel routing...(0=no, 1=yes) CHANRTSWCRT = 1 ! Specify channel routing option: 1=Muskingam-reach, 2=Musk.-Cunge-reach, 3=Diff.Wave-gridded channel_option = 3 ! Specify the reach file for reach-based routing options (e.g.: "Route_Link.nc") !route_link_f = "" ! If using channel_option=2, activate the compound channel formulation? (Default=.FALSE.) ! This option is only supported if using reach-based routing with UDMP=1. compound_channel = .FALSE. ! Specify the lake parameter file (e.g.: "LAKEPARM.nc"). ! Note REQUIRED if lakes are on. route_lake_f = "./DOMAIN/LAKEPARM.nc" ! Switch to activate baseflow bucket model...(0=none, 1=exp. bucket, 2=pass-through) GWBASESWCRT = 1 ! Groundwater/baseflow 2d mask specified on land surface model grid (e.g.: "GWBASINS.nc") !Note: Only required if baseflow model is active (1 or 2) and UDMP_OPT=0. gwbasmskfil = "./DOMAIN/GWBASINS.nc" ! Groundwater bucket parameter file (e.g.: "GWBUCKPARM.nc") GWBUCKPARM_file = "./DOMAIN/GWBUCKPARM.nc" ! User defined mapping, such NHDPlus: 0=no (default), 1=yes UDMP_OPT = 0 ! If on, specify the user-defined mapping file (e.g.: "spatialweights.nc") !udmap_file = "" / &NUDGING_nlist /
cat Gridded/namelist.hrldas
&NOAHLSM_OFFLINE HRLDAS_SETUP_FILE = "./DOMAIN/wrfinput_d01.nc" INDIR = "./FORCING" SPATIAL_FILENAME = "./DOMAIN/soil_properties.nc" OUTDIR = "./" START_YEAR = 2011 START_MONTH = 08 START_DAY = 26 START_HOUR = 00 START_MIN = 00 RESTART_FILENAME_REQUESTED = "RESTART/RESTART.2011082600_DOMAIN1" ! Specification of simulation length in days OR hours KDAY = 7 ! KHOUR = 8 ! Physics options (see the documentation for details) DYNAMIC_VEG_OPTION = 4 CANOPY_STOMATAL_RESISTANCE_OPTION = 1 BTR_OPTION = 1 RUNOFF_OPTION = 3 SURFACE_DRAG_OPTION = 1 FROZEN_SOIL_OPTION = 1 SUPERCOOLED_WATER_OPTION = 1 RADIATIVE_TRANSFER_OPTION = 3 SNOW_ALBEDO_OPTION = 2 PCP_PARTITION_OPTION = 1 TBOT_OPTION = 2 TEMP_TIME_SCHEME_OPTION = 3 GLACIER_OPTION = 2 SURFACE_RESISTANCE_OPTION = 4 ! Timesteps in units of seconds FORCING_TIMESTEP = 3600 NOAH_TIMESTEP = 3600 OUTPUT_TIMESTEP = 86400 ! Land surface model restart file write frequency RESTART_FREQUENCY_HOURS = 24 ! Split output after split_output_count output times. SPLIT_OUTPUT_COUNT = 1 ! Soil layer specification NSOIL=4 soil_thick_input(1) = 0.10 soil_thick_input(2) = 0.30 soil_thick_input(3) = 0.60 soil_thick_input(4) = 1.00 ! Forcing data measurement height for winds, temp, humidity ZLVL = 10.0 ! Restart file format options rst_bi_in = 0 !0: use netcdf input restart file !1: use parallel io for reading multiple restart files (1 per core) rst_bi_out = 0 !0: use netcdf output restart file !1: use parallel io for outputting multiple restart files (1 per core) / &WRF_HYDRO_OFFLINE ! Specification of forcing data: 1=HRLDAS-hr format, 2=HRLDAS-min format, 3=WRF, ! 4=Idealized, 5=Ideal w/ Spec.Precip., ! 6=HRLDAS-hrl y fomat w/ Spec. Precip., 7=WRF w/ Spec. Precip., ! 9=Channel-only forcing, see hydro.namelist output_channelBucket_influxes ! 10=Channel+Bucket only forcing, see hydro.namelist output_channelBucket_influxes FORC_TYP = 1 /
Now that we have covered the major functional elements that constitute a simulation, we will combine these elements and construct a simulation. This is done by placing the FORCING
, Gridded/DOMAIN
, trunk/NDHMS/Run
directories and namelist.hrldas
and hydro.namelist
files together in a directory that will be our simulation directory. However, to save disk space it is often preferable to create symbolic links rather than copying the actual files.
NOTE: We will only use symbolic links with files that we will NOT be editing
In the following steps, we will construct our simulation directory.
Step 1. Create simulation directory
We will create a directory for our simulation
mkdir -p ~/wrf-hydro-training/output/lesson2/run_gridded_default
cd ~/wrf-hydro-training/output/lesson2/run_gridded_default
Step 2. Copy model run files
We will copy the required model run files from the ~/wrf-hydro-training/wrf_hydro_nwm_public/trunk/NDHMS/Run directory. These files are small so we will make actual copies rather than symbolic links in this case. Additionally, copies are preferred in this case because a user may want to edit the *.TBL files and as stated previously symbolic links should not be used with files that we may edit.
cp ~/wrf-hydro-training/wrf_hydro_nwm_public/trunk/NDHMS/Run/*.TBL .
cp ~/wrf-hydro-training/wrf_hydro_nwm_public/trunk/NDHMS/Run/wrf_hydro.exe .
ls
CHANPARM.TBL GENPARM.TBL HYDRO.TBL MPTABLE.TBL SOILPARM.TBL wrf_hydro.exe
Step 3. Symlink DOMAIN files
We will create symbolic links to the required domain files from the ~/wrf-hydro-training/DOMAIN/Gridded
directory. These files can be large so we will make symbolic links rather than copying the actual files.
ln -sf ~/wrf-hydro-training/example_case/FORCING .
ln -sf ~/wrf-hydro-training/example_case/Gridded/DOMAIN .
ln -sf ~/wrf-hydro-training/example_case/Gridded/RESTART .
ls
CHANPARM.TBL FORCING HYDRO.TBL RESTART wrf_hydro.exe DOMAIN GENPARM.TBL MPTABLE.TBL SOILPARM.TBL
Step 4. Copy namelist files
Because we are using the default prepared namelists from the example WRF-Hydro domain, we will copy those in as well. If you were using your own namelists, they would likely be edited and copied from elsewhere. These are small text files so we will make actual copies rather than symbolic links.
cp ~/wrf-hydro-training/example_case/Gridded/namelist.hrldas .
cp ~/wrf-hydro-training/example_case/Gridded/hydro.namelist .
ls
CHANPARM.TBL GENPARM.TBL MPTABLE.TBL SOILPARM.TBL DOMAIN hydro.namelist namelist.hrldas wrf_hydro.exe FORCING HYDRO.TBL RESTART
We have now constructed our simulation directory with all the requisite files.
In the next section we will run the simulation.
Now that we have constructed our simulation directory, we can run our simulation. For this we will be using the mpirun
command, which has a number of arguments. For this simple case, we only need to supply one argument, the number of cores. This is done with the -np
argument, and we will set it to 2 cores.
We will pipe the output to a log file because running a simulation can generate a lot of standard output in the terminal.
mpirun -np 2 ./wrf_hydro.exe >> run.log 2>&1
If your simulation ran successfully, there should now be a large number of output files in the ~/wrf-hydro-training/output/lesson2/run_gridded_default
. We will describe these output files in more depth in Lesson 4. Additionally, detailed descriptions of the output files can be found in the Technical Description.
List the contents of the run directory.
ls
201108260000.LDASOUT_DOMAIN1 201108291700.LAKEOUT_DOMAIN1 201108260100.CHANOBS_DOMAIN1 201108291800.CHANOBS_DOMAIN1 201108260100.GWOUT_DOMAIN1 201108291800.GWOUT_DOMAIN1 201108260100.LAKEOUT_DOMAIN1 201108291800.LAKEOUT_DOMAIN1 201108260200.CHANOBS_DOMAIN1 201108291900.CHANOBS_DOMAIN1 201108260200.GWOUT_DOMAIN1 201108291900.GWOUT_DOMAIN1 201108260200.LAKEOUT_DOMAIN1 201108291900.LAKEOUT_DOMAIN1 201108260300.CHANOBS_DOMAIN1 201108292000.CHANOBS_DOMAIN1 201108260300.GWOUT_DOMAIN1 201108292000.GWOUT_DOMAIN1 201108260300.LAKEOUT_DOMAIN1 201108292000.LAKEOUT_DOMAIN1 201108260400.CHANOBS_DOMAIN1 201108292100.CHANOBS_DOMAIN1 201108260400.GWOUT_DOMAIN1 201108292100.GWOUT_DOMAIN1 201108260400.LAKEOUT_DOMAIN1 201108292100.LAKEOUT_DOMAIN1 201108260500.CHANOBS_DOMAIN1 201108292200.CHANOBS_DOMAIN1 201108260500.GWOUT_DOMAIN1 201108292200.GWOUT_DOMAIN1 201108260500.LAKEOUT_DOMAIN1 201108292200.LAKEOUT_DOMAIN1 201108260600.CHANOBS_DOMAIN1 201108292300.CHANOBS_DOMAIN1 201108260600.GWOUT_DOMAIN1 201108292300.GWOUT_DOMAIN1 201108260600.LAKEOUT_DOMAIN1 201108292300.LAKEOUT_DOMAIN1 201108260700.CHANOBS_DOMAIN1 201108300000.CHANOBS_DOMAIN1 201108260700.GWOUT_DOMAIN1 201108300000.GWOUT_DOMAIN1 201108260700.LAKEOUT_DOMAIN1 201108300000.LAKEOUT_DOMAIN1 201108260800.CHANOBS_DOMAIN1 201108300000.LDASOUT_DOMAIN1 201108260800.GWOUT_DOMAIN1 201108300100.CHANOBS_DOMAIN1 201108260800.LAKEOUT_DOMAIN1 201108300100.GWOUT_DOMAIN1 201108260900.CHANOBS_DOMAIN1 201108300100.LAKEOUT_DOMAIN1 201108260900.GWOUT_DOMAIN1 201108300200.CHANOBS_DOMAIN1 201108260900.LAKEOUT_DOMAIN1 201108300200.GWOUT_DOMAIN1 201108261000.CHANOBS_DOMAIN1 201108300200.LAKEOUT_DOMAIN1 201108261000.GWOUT_DOMAIN1 201108300300.CHANOBS_DOMAIN1 201108261000.LAKEOUT_DOMAIN1 201108300300.GWOUT_DOMAIN1 201108261100.CHANOBS_DOMAIN1 201108300300.LAKEOUT_DOMAIN1 201108261100.GWOUT_DOMAIN1 201108300400.CHANOBS_DOMAIN1 201108261100.LAKEOUT_DOMAIN1 201108300400.GWOUT_DOMAIN1 201108261200.CHANOBS_DOMAIN1 201108300400.LAKEOUT_DOMAIN1 201108261200.GWOUT_DOMAIN1 201108300500.CHANOBS_DOMAIN1 201108261200.LAKEOUT_DOMAIN1 201108300500.GWOUT_DOMAIN1 201108261300.CHANOBS_DOMAIN1 201108300500.LAKEOUT_DOMAIN1 201108261300.GWOUT_DOMAIN1 201108300600.CHANOBS_DOMAIN1 201108261300.LAKEOUT_DOMAIN1 201108300600.GWOUT_DOMAIN1 201108261400.CHANOBS_DOMAIN1 201108300600.LAKEOUT_DOMAIN1 201108261400.GWOUT_DOMAIN1 201108300700.CHANOBS_DOMAIN1 201108261400.LAKEOUT_DOMAIN1 201108300700.GWOUT_DOMAIN1 201108261500.CHANOBS_DOMAIN1 201108300700.LAKEOUT_DOMAIN1 201108261500.GWOUT_DOMAIN1 201108300800.CHANOBS_DOMAIN1 201108261500.LAKEOUT_DOMAIN1 201108300800.GWOUT_DOMAIN1 201108261600.CHANOBS_DOMAIN1 201108300800.LAKEOUT_DOMAIN1 201108261600.GWOUT_DOMAIN1 201108300900.CHANOBS_DOMAIN1 201108261600.LAKEOUT_DOMAIN1 201108300900.GWOUT_DOMAIN1 201108261700.CHANOBS_DOMAIN1 201108300900.LAKEOUT_DOMAIN1 201108261700.GWOUT_DOMAIN1 201108301000.CHANOBS_DOMAIN1 201108261700.LAKEOUT_DOMAIN1 201108301000.GWOUT_DOMAIN1 201108261800.CHANOBS_DOMAIN1 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201108290900.LAKEOUT_DOMAIN1 FORCING 201108291000.CHANOBS_DOMAIN1 GENPARM.TBL 201108291000.GWOUT_DOMAIN1 hydro.namelist 201108291000.LAKEOUT_DOMAIN1 HYDRO_RST.2011-08-27_00:00_DOMAIN1 201108291100.CHANOBS_DOMAIN1 HYDRO_RST.2011-08-28_00:00_DOMAIN1 201108291100.GWOUT_DOMAIN1 HYDRO_RST.2011-08-29_00:00_DOMAIN1 201108291100.LAKEOUT_DOMAIN1 HYDRO_RST.2011-08-30_00:00_DOMAIN1 201108291200.CHANOBS_DOMAIN1 HYDRO_RST.2011-08-31_00:00_DOMAIN1 201108291200.GWOUT_DOMAIN1 HYDRO_RST.2011-09-01_00:00_DOMAIN1 201108291200.LAKEOUT_DOMAIN1 HYDRO_RST.2011-09-02_00:00_DOMAIN1 201108291300.CHANOBS_DOMAIN1 HYDRO.TBL 201108291300.GWOUT_DOMAIN1 MPTABLE.TBL 201108291300.LAKEOUT_DOMAIN1 namelist.hrldas 201108291400.CHANOBS_DOMAIN1 RESTART 201108291400.GWOUT_DOMAIN1 RESTART.2011082700_DOMAIN1 201108291400.LAKEOUT_DOMAIN1 RESTART.2011082800_DOMAIN1 201108291500.CHANOBS_DOMAIN1 RESTART.2011082900_DOMAIN1 201108291500.GWOUT_DOMAIN1 RESTART.2011083000_DOMAIN1 201108291500.LAKEOUT_DOMAIN1 RESTART.2011083100_DOMAIN1 201108291600.CHANOBS_DOMAIN1 RESTART.2011090100_DOMAIN1 201108291600.GWOUT_DOMAIN1 RESTART.2011090200_DOMAIN1 201108291600.LAKEOUT_DOMAIN1 run.log 201108291700.CHANOBS_DOMAIN1 SOILPARM.TBL 201108291700.GWOUT_DOMAIN1 wrf_hydro.exe
There are also four important files for determining the success or failure of the run, diag_hydro.0000*. The number of diag files is equal to the number of cores used for the run. These diag_hydro.0000* files contain logs and diagnostics on the simulation run.
You can check that your simulation ran successfully by examining the last line of the diag files, which should read The model finished successfully........
tail -1 diag_hydro.00000
The model finished successfully.......
This concludes Lesson 2. In the next lesson, we will briefly discuss working with some of the output files. The output files from WRF-Hydro are standard netCDF4 files, and thus there are many way to work with these data. We simply cover a few Python libraries and commands that are needed for later lessons in this tutorial.
Lesson 3 is by no means a comprehensive guide to working with netCDF files.
IT IS BEST TO EITHER SHUTDOWN THIS LESSON OR CLOSE IT BEFORE PROCEEDING TO THE NEXT LESSON TO AVOID POSSIBLY EXCEEDING ALLOCATED MEMORY. Shutdown the lesson be either closing the browser tab for the lesson or selecting Kernel -> Shut Down Kernel
in JupyterLab.
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